Some of the Operating Systems in the collection.  

Apple

1. Apple II ProDOS
2. Apple Macintosh OS 10.1

Commodore

1. CP/M for Commodore 64
2. Amiga OS 3.5

DOS

1. IBM DOS
2. UniSys Icon

NeXT

1. NeXT NEXTSTEP Academic Bundle - NeXT Computers
2. NeXT NEXTSTEP Academic Bundle - HP 9000

IBM OS/2

1. IBM Os/2 Warp
2. IBM OS/2 2.0

Microsoft Windows

1. Microsoft Windows 1.0
2. Microsoft Windows 1.1
3. Microsoft Windows/386 (Windows 2.0)
4. Microsoft Windows 95 (upgrade)
5. Microsoft Windows NT Workstation
6. Microsoft Windows ME
7. Silicon Graphics Inc IRIX

Sun Microsystems

1. SUN Microsystems Java Operating System
2. SUN Microsystems Solaris (2.4, 2.5, 7, 8, 9)

Unix/Linux

1. Linex (Corel, RedHat)
2. HP-UX
3. Digitial UNIX
4. Novel UnixWare
5. AT&T Unix PC Operating System

​
Other - GUI Replacements (Desktop Manager for Windows)

• Tektronix WinDD
• HP NewWave 4.0
• DESQview/X

Windows Emulators

• Virtual PC for Mac
• Soft Windows for Unix

Basic

• Atari Basic for Atari 400/800
• Microsoft Basic II for Atari 400/800
• GFA Basic for Atari ST

Simulation:

• GPSS/H
• MedModel
• Arena

Java:

• IBM Visual Age for Java
• Borland JBuilder
• Microsoft J++

Assembler

• Atari 400/800 Assembler Editor
• Metacomco Toolkit for Amiga

​
Pascal:

• Borland Turbo Pascal for DOS
• Borland Turbo Pascal for Windows
• Kyan Pascal for Atari for Atari 400/800
• Personal Pascal for Atari ST

C

• Borland Turbo C for DOS
• Borland Turbo C for Windows
• Lattice C Compiler for Amiga

C++

• Borland Turbo C++ for DOS
• Borland Turbo C++ for Windows
• Microsoft Visual C++

Fortran

• Microsoft Fortran 

Logo

• Dr. Logo for DOS
• Commodore 64 Logo

Pilot

• Atari Pilot

Modula/2

• TDI Software Modula-2 for Amiga
• M2 for Amiga

Database Computer Languages

• SyBase PowerBuilder
• Microsoft FoxPro

NeXTSTEP

Other

• AmigaVision
• Apple HyperCard
• CodeWriter for the Atari 400/800

Various Operating Systems:

• AT&T Unix
• DEC TruUnix
• HP-UX (do not have manuals)
  
• Sun Solaris
• Silicon Graphics Inc (SGI) IRIX
• NeXTStep
• Linux (RedHat)​
• Apple OSX 10.1
• CP/M (for Commodore 64)
• Microsoft Windows (Windows 1.0, Windows NT, Windows 98)
• IBM OS/2
• AmigaOS
• Atari TOS

Would like to acquire:

• VMS media (I have the Compaq/DEC VMS manuals)
• Corel Linux
• Mandrake Linux
• Caldera OpenLinux
• SuSE Linux

Its interesting to look at the Java Development Environments over the years.  I currently use IntelliJ - but there is no boxed version for it.

Java IDEs in the collection:

• IBM Visual Age for Java
• Borland JBuilder
• Microsoft Visual J++
• Symantec Visual Cafe for Java
• Code Warrior for Java
  
• Power J (official disks - no manuals or box)

Other Java IDEs:

• Cosmo Code
• Asymetrix Super Cede
• SunSoft Java Workshop
• Visix Vibe DE

Lotus 1-2-3 for Windows (version 1.0), Word Perfect Dealer package which is kinda interesting, Corel Word Perfect Suite (Corel is a Canadian company), and then a neat document converter called "Software Bridge" that lists all these other word processors on the front cover (WordPerfect, WordStar, Wang PC, CEOWrite, WordMarc, Sprint, Navy DIF, Microsoft Word, DisplayWrite, MultiMate, VolksWriter, Dec/DX, Samina, DAC/RFT, DCA/FFT). I remember WordPerfect, WordStar, DisplayWrite and MultiWrite - but not the others.

Just received this Visual Commuter laptop from a friend.  ​Has a version of Microsoft Flight Simulator (1984) that boots up automatically.

Information:
http://www.old-computers.com/museum/computer.asp?c=1193&st=1
​http://www.oldcomputers.net/commuter.html